Adding explanatory variables: the SABRE analysis

LINE

We carry out the backward elimination as follows:

SABRE SESSION:INPUT AND OUTPUT
C input data and transform variables 

data case move age year dur ed ch1 ch2 ch3 ch4 msb mse esb ese &  
ocb oce mbu mrm mfm msb1 epm eoj esb1 ops osb1 msb2 esb2 osb2 osb3   
read rochmig.dat                           
                   
       6349 observations in dataset
                              
yvar move                          
transform tempage age - 30         
transform trage tempage / 10    
transform trage2 trage * trage       
transform trage3 trage2 * trage
transform trage4 trage3 * trage         
transform trage5 trage4 * trage   
transform trage6 trage5 * trage          
transform ldur log dur 
C convert explanatory variables to factors 
factor ed fed                
factor ch1 fch1          
factor ch2 fch2      
factor ch3 fch3      
factor ch4 fch4       
factor msb fmsb  
factor msb1 fmsb1         
factor msb2 fmsb2         
factor mbu fmbu          
factor mrm fmrm       
factor mfm fmfm      
factor eoj feoj          
factor ops fops              
factor epm fepm         
factor esb2 fesb2          
factor osb3 fosb3          
C fit full model   
                        
lfit int ldur year trage trage2 trage3 trage4 trage5 trage6 &  
fed fmbu fmfm fmrm fmsb fch1 fch2 fch3 fch4 fesb2 fosb3 fepm fops feoj
                           
    Iteration        Deviance        Reduction
    __________________________________________
        1           8801.5829    
        2           2932.0559        5870.    
        3           2260.2230        671.8    
        4           2115.9063        144.3    
        5           2095.5823        20.32    
        6           2093.5142        2.068    
        7           2093.1257       0.3885    
        8           2093.0786       0.4706E-01
        9           2093.0765       0.2120E-02
       10           2093.0760       0.5102E-03
       11           2093.0758       0.1876E-03
                
dis est                       
                   
    Parameter              Estimate         S. Error
    ___________________________________________________
    int                     1.3741          0.74144    
    ldur                  -0.97671          0.75658E-01
    year                  -0.42966E-01      0.77703E-02
    trage                  0.48422          0.34821    
    trage2                -0.81192E-01      0.63693    
    trage3                -0.58212          0.53301    
    trage4                 0.30160          0.57210    
    trage5                 0.42878          0.20849    
    trage6                -0.23204          0.15366    
    fed   ( 1)                  0.          ALIASED [I]
    fed   ( 2)            -0.29439E-01      0.29414    
    fed   ( 3)            -0.42630          0.31085    
    fed   ( 4)             0.19577E-01      0.21836    
    fed   ( 5)            -0.25889          0.23502    
    fmbu  ( 1)                  0.          ALIASED [I]
    fmbu  ( 2)              1.2831          0.64008    
    fmfm  ( 1)                  0.          ALIASED [I]
    fmfm  ( 2)             0.46489          0.24075    
    fmrm  ( 1)                  0.          ALIASED [I]
    fmrm  ( 2)             0.97834          0.80128    
    fmsb  ( 1)                  0.          ALIASED [I]
    fmsb  ( 2)            -0.44557          0.19011    
    fmsb  ( 3)            -0.26831          0.49968    
    fmsb  ( 4)             0.78074          0.56836    
    fmsb  ( 5)             -7.9406           82.102    
    fch1  ( 1)                  0.          ALIASED [I]
    fch1  ( 2)            -0.76060E-01      0.38951    
    fch2  ( 1)                  0.          ALIASED [I]
    fch2  ( 2)            -0.68220E-01      0.44099    
    fch3  ( 1)                  0.          ALIASED [I]
    fch3  ( 2)             -1.2554          0.75279    
    fch4  ( 1)                  0.          ALIASED [I]
    fch4  ( 2)             0.23823E-01      0.58680    
    fesb2 ( 1)                  0.          ALIASED [I]
    fesb2 ( 2)             0.52758          0.32558    
    fesb2 ( 3)             0.90635          0.44986    
    fosb3 ( 1)                  0.          ALIASED [I]
    fosb3 ( 2)             0.83994          0.16945    
    fepm  ( 1)                  0.          ALIASED [I]
    fepm  ( 2)            -0.22312          0.50383    
    fops  ( 1)                  0.          ALIASED [I]
    fops  ( 2)              1.1732          0.36420    
    feoj  ( 1)                  0.          ALIASED [I]
    feoj  ( 2)             0.51723          0.43284    
                             
C note that the lowest level of each factor is set to zero
C fch1, fch2 and fch4 have very low t-ratios
C remove fch4 first, as this has lowest t-ratio
     
C To save space we use the MONITOR NO command to produce
C summary information only on the progress of the fitting algorithm
            
monitor no 
     
lfit -fch4                              
       
    Deviance =     2093.0774     at iteration    11
       
lfit -fch1                       
      
    Deviance =     2093.1162     at iteration    11
       
lfit -fch2                               
        
    Deviance =     2093.1470     at iteration    11
         
lfit -fepm                            
       
    Deviance =     2093.3436     at iteration    11
       
lfit -feoj                      
       
    Deviance =     2094.8028     at iteration    11
        
C the changes in deviance above are not significant at the 10% level
C compared with 2.71, ie. chi-sq. for 1 degree of freedom
C for fed some levels appear more significant than others; test fed.
     
lfit -fed                            
       
    Deviance =     2100.8431     at iteration    11
       
C change in deviance of 6.04 is not significant at the 10% level
C compared with 7.78, ie. chi-sq. for 4 degrees of freedom
C fed can also be removed from the model
      
dis est                          
        
    Parameter              Estimate         S. Error
    ___________________________________________________
    int                     1.0028          0.70183    
    ldur                  -0.99577          0.74243E-01
    year                  -0.39207E-01      0.74412E-02
    trage                  0.43563          0.33628    
    trage2                -0.10207          0.62253    
    trage3                -0.54183          0.52659    
    trage4                 0.29816          0.56929    
    trage5                 0.41445          0.20703    
    trage6                -0.22861          0.15373    
    fmbu  ( 1)                  0.          ALIASED [I]
    fmbu  ( 2)              1.2363          0.64637    
    fmfm  ( 1)                  0.          ALIASED [I]
    fmfm  ( 2)             0.46619          0.24024    
    fmrm  ( 1)                  0.          ALIASED [I]
    fmrm  ( 2)              1.0371          0.79233    
    fmsb  ( 1)                  0.          ALIASED [I]
    fmsb  ( 2)            -0.44911          0.18890    
    fmsb  ( 3)            -0.19336          0.49091    
    fmsb  ( 4)             0.71328          0.55703    
    fmsb  ( 5)             -7.8189           82.104    
    fch3  ( 1)                  0.          ALIASED [I]
    fch3  ( 2)             -1.2803          0.75074    
    fesb2 ( 1)                  0.          ALIASED [I]
    fesb2 ( 2)             0.55897          0.32382    
    fesb2 ( 3)              1.0902          0.39518    
    fosb3 ( 1)                  0.          ALIASED [I]
    fosb3 ( 2)             0.83672          0.16570    
    fops  ( 1)                  0.          ALIASED [I]
    fops  ( 2)              1.0891          0.28586    
      
C level 2 of fmsb has a high t-ratio; the others are lower 
C test fmsb
      
lfit -fmsb                    
      
    Deviance =     2110.0394     at iteration    10
         
C the change in deviance is significant at the 10% level
C compared with 7.78, ie. chi-sq. for 4 degree of freedom 
       
C The factor fmsb is significant, but the effect of  
C some levels is small. Therefore collapse some levels of fmsb
C and use the 3 level factor fmsb1 instead. 
lfit +fmsb1                           
      
    Deviance =     2102.9664     at iteration    10
       
dis est                       

    Parameter              Estimate         S. Error
    ___________________________________________________
    int                    0.95067          0.69857    
    ldur                  -0.99776          0.74232E-01
    year                  -0.38286E-01      0.73967E-02
    trage                  0.42904          0.33667    
    trage2                -0.17240          0.61843    
    trage3                -0.57939          0.52601    
    trage4                 0.34715          0.56440    
    trage5                 0.43121          0.20700    
    trage6                -0.23906          0.15230    
    fmbu  ( 1)                  0.          ALIASED [I]
    fmbu  ( 2)              1.2313          0.64655    
    fmfm  ( 1)                  0.          ALIASED [I]
    fmfm  ( 2)             0.46823          0.24019    
    fmrm  ( 1)                  0.          ALIASED [I]
    fmrm  ( 2)              1.4241          0.75185    
    fch3  ( 1)                  0.          ALIASED [I]
    fch3  ( 2)             -1.2177          0.74682    
    fesb2 ( 1)                  0.          ALIASED [I]
    fesb2 ( 2)             0.55546          0.32356    
    fesb2 ( 3)              1.0911          0.39499    
    fosb3 ( 1)                  0.          ALIASED [I]
    fosb3 ( 2)             0.83211          0.16526    
    fops  ( 1)                  0.          ALIASED [I]
    fops  ( 2)              1.1032          0.28470    
    fmsb1 ( 1)                  0.          ALIASED [I]
    fmsb1 ( 2)            -0.44502          0.18885    
    fmsb1 ( 3)             0.11026          0.40049 
            
C The change in deviance is significant at the 
C 10% level compared with 4.6, ie. chi-sq. for 2 degree of freedom.
C Only level 2 seems significant.
C Collapse variable further; use 2 level factor msb2 instead. 
         
lfit -fmsb1                           
                  
    Deviance =     2110.0394     at iteration    10
                      
lfit +fmsb2                        
                       
    Deviance =     2103.0411     at iteration    10
                                 
dis est                       
                            
    Parameter              Estimate         S. Error
    ___________________________________________________
    int                    0.98308          0.68858    
    ldur                  -0.99954          0.73925E-01
    year                  -0.38417E-01      0.73821E-02
    trage                  0.44814          0.32946    
    trage2                -0.18073          0.61760    
    trage3                -0.58213          0.52585    
    trage4                 0.35071          0.56434    
    trage5                 0.43121          0.20699    
    trage6                -0.23961          0.15231    
    fmbu  ( 1)                  0.          ALIASED [I]
    fmbu  ( 2)              1.2346          0.64645    
    fmfm  ( 1)                  0.          ALIASED [I]
    fmfm  ( 2)             0.46040          0.23846    
    fmrm  ( 1)                  0.          ALIASED [I]
    fmrm  ( 2)              1.5114          0.68339    
    fch3  ( 1)                  0.          ALIASED [I]
    fch3  ( 2)             -1.2225          0.74642    
    fesb2 ( 1)                  0.          ALIASED [I]
    fesb2 ( 2)             0.55741          0.32354    
    fesb2 ( 3)              1.0932          0.39493    
    fosb3 ( 1)                  0.          ALIASED [I]
    fosb3 ( 2)             0.83115          0.16524    
    fops  ( 1)                  0.          ALIASED [I]
    fops  ( 2)              1.1069          0.28439    
    fmsb2 ( 1)                  0.          ALIASED [I]
    fmsb2 ( 2)            -0.46453          0.17487    
                                                             
C The addition of fmsb2 to the model produces a change in 
C deviance significant at the 10% level. The coefficient estimate is  
C now significant. Keep fmsb2 in the model.
      
C Remove the remaining factors one by one and compare each 
C change in deviance with 2.71 (chi-sq. at the 10% level, 
C 1 degree of freedom). 
         
lfit -fch3                      
          
    Deviance =     2106.7537     at iteration    10
                 
lfit +fch3                        
                  
    Deviance =     2103.0411     at iteration    10
                  
lfit -fmbu                         
                      
    Deviance =     2105.8325     at iteration    10
                           
lfit +fmbu                       
     
    Deviance =     2103.0411     at iteration    10
    
lfit -fmrm                         
     
    Deviance =     2106.7500     at iteration    10
      
lfit +fmrm                      
     
    Deviance =     2103.0411     at iteration    10
        
lfit -fmfm                         
      
    Deviance =     2106.5408     at iteration    10
      
lfit +fmfm                        
       
    Deviance =     2103.0411     at iteration    10
         
lfit -fesb2                        
     
    Deviance =     2111.2846     at iteration    10
     
lfit +fesb2                      
     
    Deviance =     2103.0411     at iteration    10
     
lfit -fops                         
     
    Deviance =     2115.7878     at iteration    10
   
lfit +fops                     
     
    Deviance =     2103.0411     at iteration    10
    
lfit -fosb3                         
     
    Deviance =     2126.2913     at iteration    10
     
lfit +fosb3                          
       
    Deviance =     2103.0411     at iteration    10
   
C All the above factors are significant.
                            
dis est                        
          
    Parameter              Estimate         S. Error
    ___________________________________________________
    int                    0.98308          0.68858    
    ldur                  -0.99954          0.73925E-01
    year                  -0.38417E-01      0.73821E-02
    trage                  0.44814          0.32946    
    trage2                -0.18073          0.61760    
    trage3                -0.58213          0.52585    
    trage4                 0.35071          0.56434    
    trage5                 0.43121          0.20699    
    trage6                -0.23961          0.15231    
    fch3  ( 1)                  0.          ALIASED [I]
    fch3  ( 2)             -1.2225          0.74642    
    fmbu  ( 1)                  0.          ALIASED [I]
    fmbu  ( 2)              1.2346          0.64645    
    fmrm  ( 1)                  0.          ALIASED [I]
    fmrm  ( 2)              1.5114          0.68339    
    fmfm  ( 1)                  0.          ALIASED [I]
    fmfm  ( 2)             0.46040          0.23846    
    fmsb2 ( 1)                  0.          ALIASED [I]
    fmsb2 ( 2)            -0.46453          0.17487    
    fesb2 ( 1)                  0.          ALIASED [I]
    fesb2 ( 2)             0.55741          0.32354    
    fesb2 ( 3)              1.0932          0.39493    
    fops  ( 1)                  0.          ALIASED [I]
    fops  ( 2)              1.1069          0.28439    
    fosb3 ( 1)                  0.          ALIASED [I]
    fosb3 ( 2)             0.83115          0.16524    
      
C Is trage6 still significant?  
lfit -trage6
     
    Deviance =     2106.0860     at iteration     8
      
C trage6 is significant at the 10% level
C The above model is therefore our final main effects model. 
stop


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